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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015948747.1_cds_XP_016489907.1_80382
CDS Infomation

[gene=LOC107809747] [db_xref=GeneID:107809747] [protein=IAA-amino acid hydrolase ILR1-like 3] [protein_id=XP_016489907.1] [location=complement(join(25507..25881,26159..26287,26400..26714,26803..26928,28704..29075))] [gbkey=CDS]
Sequence

ATGGGTTCGTTTTGCATAGACTTGATACTCATATTGACATTGCTATCGACGAGCTTTCCG
TACAATTCATCGGCTGCAGATACAGAAACTCATTTGGGATCTGAAACGGAGTCACTAACT
CGGGAGCTTCTGGAGTCGGCGAGGGAACCCGAGTTTTTGGATTGGTTGAGAAGGGTGAGA
AGGAGAATCCATGAGTACCCAGAATTGTCATTTCAAGAGCACCAAACCAGTCAACTCATC
CGAAATGAGCTGGACTCACTTGGCGTCAAGTACTCCTGGCCAGTGGCTAAAACTGGTTTG
GTGGGAAGCATAGGGTCAGGTGCTCAACCTTGGTTTGGTCTGAGAGCTGACATGGATGCT
CTCCCCCTTCAGGAGTTGGTAGATTGGGAGTACAAAAGCAAGATTGATGGCAAAATGCAT
GCCTGTGGCCATGATGCTCATGTCACCATGCTGCTTGGAGCAGCCAGATTGATTCAGAAC
AGAAGGGACAAGTTGAAGGGCACAGTTAAGCTTGTCTTCCAACCTGCAGAAGAAGGTTAT
GCGGGTGCCTCCTATATGTTAGAAGAAGGCGCATTAGATGGGTTTAAAGCAATATTTGGC
TTGCATGTCTGGCCATTTATGCCCGTAGGCACTATTGGTTCGAGACCTGGTCCTATTATG
GCTGGATCAAGCAGGTTTACTGCAGTGGTGCAAGGGAAAGGCGGCCATGCAGCAACACCA
CATAAAACTAGGGATCCAATGTTGGCTGCTTCTATGGCAGTTCTTGCACTCCAACAAATT
ATTTCTCGAGAAACTGATCCTCTGGAGCCTAGGGTTGTCTCTGTTACATTTGTAGATGGT
GGTCAAGCTGGAAATGTAATCCCTGCAAGTGTAAGGTTTGGTGGAACCTTCCGGTTCATG
ACATTAGAAGGATATTCCTATCTTAAGCAGAGGATCAAAGAGATCATTGAGACTCAAGCA
GGAGTACATCAATGTTCTGCCACCATTGATTTCATGGAGGAAATGAGGCCATATCCTCCA
ACTATAAATGATCCTACTATCTATGATCATGGTAAAAGAGTTGGAGAAATCTTGCTTGGC
GAGAGTAACGTGCAGCATTCCCCAGCTTTAATGGCTGCAGAGGACTTTGGGTTCTATTCC
CAGAAGATGGCAACTGCATTTTTCTTCATTGGGACACAAAATAAAACAGCCGTGTCTGCT
ATTAAAGGTTTGCACTCCCCATACTTCACCATTGATGAAGAAGTTCTTCCAATAGGAGCA
GCCCTCCATGCTGCTGTTGCCATATCTTACATGGATACACATTCTGAGTCAGAGTGA

Peptide Sequence

PEP ID

XP_016489907.1
PEP Infomation

PREDICTED: IAA-amino acid hydrolase ILR1-like 3 [Nicotiana tabacum]
Sequence

MGSFCIDLILILTLLSTSFPYNSSAADTETHLGSETESLTRELLESAREPEFLDWLRRVR
RRIHEYPELSFQEHQTSQLIRNELDSLGVKYSWPVAKTGLVGSIGSGAQPWFGLRADMDA
LPLQELVDWEYKSKIDGKMHACGHDAHVTMLLGAARLIQNRRDKLKGTVKLVFQPAEEGY
AGASYMLEEGALDGFKAIFGLHVWPFMPVGTIGSRPGPIMAGSSRFTAVVQGKGGHAATP
HKTRDPMLAASMAVLALQQIISRETDPLEPRVVSVTFVDGGQAGNVIPASVRFGGTFRFM
TLEGYSYLKQRIKEIIETQAGVHQCSATIDFMEEMRPYPPTINDPTIYDHGKRVGEILLG
ESNVQHSPALMAAEDFGFYSQKMATAFFFIGTQNKTAVSAIKGLHSPYFTIDEEVLPIGA
ALHAAVAISYMDTHSESE

Transcript Sequence

Gene sequence data has not been registered.